مقالات علمی چاپ شده در مجلات

1. "A parametric empirical Bayes (PEB) approach for estimating maize progress percentage at field scale"
   Hamid Pezeshk, Parviz Irannejad, Nozar Ghahreman, Mahdi Ghamghami
   AGRICULTURAL AND FOREST METEOROLOGY, Vol. 281, No 1, 2020
2. "A Network-based Comparison between Molecular Apocrine Breast Cancer Tumor and Basal and Luminal Tumors by Joint Graphical Lasso"
   Hamid Pezeshk, مهدی صادقی, حسین محجوب , Maryam Shahdoost
   IEEE-ACM Transactions on Computational Biology and Bioinformatics, Vol. 1, No 1, pp.1-1, 2019
3. "MSeq-CNV: accurate detection of Copy Number Variation from Sequencing of Multiple samples"
   Mehdi Sadeghi, Hamid Pezeshk, Seyyed Amir Malek Pour
   Scientific Reports, Vol. 22, No 15, 2018
4. "Denoising of genetic switches based on Parrondo’s paradox Atiyeh Fotoohinasab a, Emad Fatemizadeh b, Hamid Pezeshk c,d,"
   Hamid Pezeshk
   PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS, Vol. 493, No 4371, pp.410-420, 2018
5. "Some node ordering methods for k2 algorithm"
   رزا اقدم , Hamid Pezeshk, وحید رضایی تبار
   computational intelligence, Vol. 34, No 3, pp.1-17, 2018
6. "Parrondo's Paradox for Games with Three Players"
   Mehdi Sadeghi, I Chaubey , Hamid Pezeshk, نسیم اجلالی
   Spectrum Research Repository (Concordia University), Vol. 1, No 1, pp.1-18, 2018
7. "F-MAP: A Bayesian approach to infer the gene regulatory network using external hints"
   Mehdi Sadeghi, حسین محجوب , Hamid Pezeshk, Maryam Shahdoost
   PLoS One, Vol. 9, No 12, 2017
8. "Task modulates functional connectivity networks in free viewing behavior"
   Hamid Pezeshk, Cees Van Leeuwen, Ali Masoudi Nejad, Radha Nila Meghanathan, Andry R. Nikolaev, Hossein Seidkhani
   NEUROIMAGE, Vol. 159, pp.289-301, 2017
9. "Stochastic Cell Fate and Longevity of Offspring"
   Hamid Pezeshk, Mehdi Sadeghi, Faezeh Dorri
   Cell Journal, Vol. 19, No 3, pp.343-351, 2017
10. "Optimization of electrospinning parameters for polyacrylonitrile-MgO nanofibers applied in air filtration"
    Somaye Farhang Dehghan, Hamid Pezeshk, Farideh Golbabaei, Bozorgmehr Maddah, Masoud Latifi, Mahdi Hasanzadeh, Farhang Akbar Khanzadeh
    JOURNAL OF THE AIR & WASTE MANAGEMENT ASSOCIATION, Vol. 66, No 9, pp.912-921, 2016
11. "Some node ordering methods for the K2 algorithm"
    Hamid Pezeshk, وحید رضایی تبار, رزا اقدم
    COMPUTATIONAL INTELLIGENCE, Vol. 111, No 111, 2016
12. "PSE-HMM: genome-wide CNV detection from NGS data using an HMM with Position-Specific Emission probabilities"
    Seyyed Amir Malek Pour, Mehdi Sadeghi, Hamid Pezeshk
    BMC BIOINFORMATICS, Vol. 18, No 1, pp.2-11, 2016
13. "A mixed Bayesian/ Frequentist approach in sample size determination problem for clinical trials"
    John Gittins , Maryam Bideli, Hamid Pezeshk
    Progress in Biological Sciences, Vol. 6, No 1, pp.1-10, 2016
14. "MGP-HMM: Detecting genome-wide CNVs using an HMM for modeling mate pair insertion sizes and read counts"
    Seyyed Amir Malek Pour, Mehdi Sadeghi, Hamid Pezeshk
    MATHEMATICAL BIOSCIENCES, Vol. 279, No 279, pp.53-62, 2016
15. "ESTIMATION OF SOMATIC CELL COUNT,AS GOLD STANDARD TO DETECT SUBCLINICAL MASTITIS IN DROMEDARY CAMEL"
    I Narimani, Ali Akbar Moosavi Movahhedi, Amir Niasari-naslaji, Hamid Pezeshk, A.b Atakpour, S Ghafari, Peyman Nickchi, S Safi, S.h Shirazi Beheshtiha, H Arabha, R Samiei, M Amjadi, A.a Haji Moradlou
    JOURNAL OF CAMEL PRACTICE AND RESEARCH, Vol. 23, No 1, pp.175-178, 2016
16. "Increased robustness of early embryogenesis through collective decision-making by key transcription factors"
    Ruzbeh Tusserkani, Ali Sharifi- Zarchi, Mehdi Totonchi, Keynoush Khaloughi, Razieh Karamzadeh, Marcos J.arauzo -bravo, Hossein Baharvand, Hamidreza Chitsaz, Mehdi Sadeghi, Hamid Pezeshk
    BMC Systems Biology, Vol. 9, No 1, 2015
17. "Protein Complex Discovery by Interaction Filtering from Protein Interaction Networks Using Mutual Rank Coexpression and Seqence Similarity"
    Ali Kazemi-pour, Bahram Golyaei, Hamid Pezeshk
    Biomed Research International, Vol. 2015, No 2015, pp.1-7, 2015
18. "Identification and Prioritization Genes Related to Familial Hypercholesterolemia Quantitative Trait Loci Using Gene Ontology and Protein Interaction Networks"
    Ali Kazemi-pour, Behjat Kalantari- Kalantari Khandani, Bahram Golyaei, Hamid Pezeshk
    Research in Molecular Medicine (RMM), Vol. 3, No 1, pp.16-21, 2015
19. "Evaluation of the Effective Factors on Profit Efficiency in Branches of Sina Bank"
    Hamid Pezeshk, Reza Tehrani
    Academic Journal of Accounting and Economics Researches, Vol. 3, No 3, pp.316-326, 2014
20. "An Optimization Approach to Calculating Sample Sizes with Binary Responses"
    Hamid Pezeshk, Paul Marriott , واحد معروفی
    JOURNAL OF BIOPHARMACEUTICAL STATISTICS, Vol. 24, No 2, pp.715-731, 2014
21. "ProDomAs, protein domain assignment algorithm using center-based clustering and independent dominating set"
    Hamid Pezeshk, Elnaz Saberi Ansari, Mehdi Sadeghi, Changiz Eslahchi
    Proteins: Structure, Function, and Bioinformatics, Vol. 82, No 9, pp.1937-1946, 2014
22. "Generalized Baum- Welch Algorithm Based on the Similarity between Seguences"
    Horacio Perez Sa' Nchez, Hamid Pezeshk, Vahid Rezaei
    PLoS One, Vol. 8, No 12, 2013
23. "SSP: An interval integer linear programming for de novo transcriptome assembly and isoform discovery of RNA-seq reads"
    Zhaleh Safikhani, چنگیز اصلاح چی, Hamid Pezeshk, مهدی صادقی
    GENOMICS, Vol. 102, No 5, pp.507-514, 2013
24. "Assignment of Protein Sequences to Protein Family Profiles Using Spatial Statistics"
    Mehdi Sadehghi, Hamid Pezeshk, Changiz Eslahchi, Vahid Rezaei
    MATCH-COMMUNICATIONS IN MATHEMATICAL AND IN COMPUTER CHEMISTRY, Vol. 69, No 1, pp.7-24, 2013
25. "A Clustering Approach for Estimating Parameters of a Profile Hidden Markov Model"
    Hamid Pezeshk
    International Journal of Data Mining and Bioinformatics, Vol. 8, No 1, pp.66-82, 2013
26. "Optimizing aeration rates for minimizing membrane fouling and its effect on sludge characteristics in a moving bed membrane bioreactor"
    Yuosef Rahimi , Naser Mehrdadi, Hamid Pezeshk, Mehran Habibi Rezaei, Ali Torabiyan, Gholam Reza Nabi Bidhendi
    JOURNAL OF HAZARDOUS MATERIALS, Vol. 186, pp.1097-1102, 2011
27. "Sample Size Determination in Clinical Trials"
    Hamid Pezeshk, Jc Gittins
    Perspect Clin Res, Vol. 1, No 2, pp.67-69, 2010
28. "A Bayesian cost - benefit approach to the determination of Sample Size in clinical trials"
    T Kikuchi , Hamid Pezeshk, Jc Gittins
    STATISTICS IN MEDICINE, Vol. 27, No 1, pp.82-68, 2008
29. "A tale of two symmetrical tails : Structural and functional characteristics of palindromes in proteins"
    Mehdi Kargar , Armita Sheari , Changiz Eslahchi , Shahriar Arab , Hamid Pezeshk, Ali Katanforoush , Sayed Amir Marashi , Mehdi Sadeghi
    BMC BIOINFORMATICS, Vol. 9, 2008
30. "The Performacnes of Chi - square Test and Complexity Measures for Signal Recognition in Biological Sequences"
    H Poormohammadi , M Kargar , L Pirhaji , M Sadeghi , Hamid Pezeshk, Changiz Eslahchi , A Sheari
    JOURNAL OF THEORETICAL BIOLOGY, Vol. 251, No 2, pp.387-380, 2007
31. "Beta - sheet capping : signals that initiate and terminate beta - sheet formation"
    Sa Marashi , N Gharaei , F Farzadfard , Hamid Pezeshk
    JOURNAL OF STRUCTURAL BIOLOGY, Vol. 161, No 1, pp.101-110, 2007
32. "Haplotyping Problem :A Clustering Approach"
    Hadi Poormohammadi , Hamid Pezeshk, Mehdi Sadeghi , Changiz Eslahchi , Mehdi Kargar
    AMERICAN JOURNAL OF PHYSICS, Vol. 936, No 1, pp.185-190, 2007
33. "Adaptation of proteins to different environments : a comparison of proteome structural properties in Bacillus subtilis and Escherichia coli"
    Reza Behrouzi , Hamid Pezeshk, Seyed Amir Marashi
    JOURNAL OF THEORETICAL BIOLOGY, Vol. 244, No 1, pp.127-132, 2007
34. "The influence of deposit control additicves on exhaust CO and HC emissions from gasoline engines ( case study : Tehran )"
    Gholamreza Nabi Bidhendi , Hamid Pezeshk, Ali Daryabeigi Zand , Ali Reza Mikaeili
    TRANSPORTATION RESEARCH PART D-TRANSPORT AND ENVIRONMENT, Vol. 12, No 3, pp.194-189, 2007
35. "the influance of deposit control additives on nitrpgen oxides emissions from spark ignition engines case study : tehran"
    Akbar Baghvand, Hamid Pezeshk, Ali Daryabeygi Zand , Gholam Reza Nabi Bidhendi, Am Tabrizi
    Pakistan Journal of Biological Sciences, Vol. 10, No 8, pp.1353-1349, 2007
36. "The Influience of Deposit control Additives on Nitrogen Oxides Emissions from Spark Ignition Engines"
    Akbar Baghvand, Daryabeigi Zand , Hamid Pezeshk, Gn Bidhendi , Mikaekili Tabrizi
    Pakistan Journal of Biological Sciences, Vol. 10, No 8, pp.1349-1353, 2007
37. "THE INFLUENCE OF DEPOSIT CONTROL ADDITIVES ON NITROGEN OXIDES EMISSIOON FROM SPARK IGNITION NENGINES"
    Gn Bidhendi , Hamid Pezeshk, Akbar Baghvand, Am Tabrizi , Ad Zand
    Pakistan Journal of Biological Sciences, Vol. 10, No 8, pp.1349-1353, 2007
38. "Bayesian approach to determine the number of subsequent users of a new treatment"
    Hamid Pezeshk, John Gittins
    STATISTICAL METHODS IN MEDICAL RESEARCH, Vol. 15, No 6, pp.585-592, 2006
39. "Impact of RNA structure on the prediction of donor and acceptor splice sites"
    Sayed Amir Marashi , Hamid Pezeshk, Changiz Eslahchi , Mehdi Sadeghi
    BMC BIOINFORMATICS, Vol. -, pp.1-8, 2006
40. "A Cost - benefit approach to the amount of experimentation in clinical trials"
    John Gittins , John Gittins , Hamid Pezeshk
    DRUG INFORMATION JOURNAL, Vol. 40, No 4, pp.411-407, 2006
41. "Spatial Distribution of Fractures in the Asmari Formation of Iran in Subsurface Environment : Effect of Lithology and Petrophysical Properties"
    Hamid Pezeshk, Masoud Nemati
    Natural Resources Research, Vol. 14, No 4, pp.316-305, 2005
42. "A Fully Bayesian Sample Size Determination for Inference on the Difference of two Binomial Proportion"
    Hamid Pezeshk, Vahed Maroufy
    IRANIAN INTERNATIONAL JOURNAL OF SCIENCE, Vol. 6, No 2, pp.203-221, 2005
43. "Bayesian techniques for sample size determination in clinical trials : a short review"
    Hamid Pezeshk
    STATISTICAL METHODS IN MEDICAL RESEARCH, Vol. 16, No 6, pp.489-504, 2003
44. "A decision theoretic approach to sample size determination in clinical trials"
    Jc Gittins , Hamid Pezeshk
    JOURNAL OF BIOPHARMACEUTICAL STATISTICS, Vol. 12, No 4, pp.535-551, 2002
45. "How Many Subjects – A Bayesian Approach to the Design of a Clinical Trial"
    Hamid Pezeshk
    IRANIAN INTERNATIONAL JOURNAL OF SCIENCE, Vol. 3, No 1, pp.127-133, 2002
46. "A FULLY BAYESIAN APPROACHTO CALCULATING SAMPLE SIZES FOR CLINICAL TRIALS WITH BINARY RESPONSE"
    Hamid Pezeshk, John Gittins
    DRUG INFORMATION JOURNAL, Vol. 36, No 1, pp.143-150, 2002
47. "A Behavioural Bayes Method for Determining the Size of a Clinical Trial"
    John Gittins , Hamid Pezeshk
    DRUG INFORMATION JOURNAL, Vol. 34, No 2, pp.355-363, 2000
48. "How Large Should a Clinical Trial be The Statistician"
    John Gittins, Hamid Pezeshk
    The journal of the institute of wood science, Vol. 49, No 2, pp.177-187, 2000
49. "A Behavioural Bayesian Method for Sample Size Determination in Clinical Trials"
    Hamid Pezeshk, John Gittins
    International Workshop on Objective Bayesian Methodology, Valencia, Vol. -, pp.1-10, 2000
50. "The Car and the Goats"
    Hamid Pezeshk
    Culture and Math, Vol. 99, No 1, pp.72-79, 1994
51. "A Shock Model Based on the Atoms of a Poisson Random Measure"
    Ar Soltani , Hamid Pezeshk
    Bulletin of the Iranian Mathematical Society, Vol. 17, No 1, pp.55-66, 1990
52. "The Role and Importance of Genome Sequencing in Prediction of Cancer Risk"
    Mehdi Mohammad Sadeghi, Hamid Pezeshk
    International Journal of Biotechnology and Bioengineering, Vol. 11, 1396
53. "متیله کردن DNA....."
    مارکوس . جی آروزو براور، حسین بهاروند، مهدی صادقی، حمیدرضا چیت ساز، هانس . آر شولر، ریان.ج تفت، حمید پزشک، مهدی توتونچی، کنجرو آداچی، دنیلا گرووسکا، علی شریفی زارچی
    BMC GENOMICS، نسخه 18، شماره 12، 1396
54. "فلسفه آمار ( 2 )"
    حمید پزشک
    نشر ریاضی، نسخه 15، شماره 2، صفحات:56-66، 1385
55. "طراحی و تبیین مدلی برای توسعه دانشگاه مجازی ایران"
    امیر مانیان، حمید پزشک، غلامعلی منتظر ، محمد موسی خانی
    فرهنگ مدیریت، نسخه 3، شماره 10، صفحات:5-34، 1384
56. "رهیافت بیز برای تعیین اندازه نمونه"
    حمید پزشک
    مجله علوم دانشگاه تهران، نسخه 30، شماره 1، 1383
57. "تعیین اندازه ی نمونه ی یک آزمایه با استفاده از روش لیندلی"
    حمید پزشک
    مجله پژوهش های اماری ایران، نسخه 1، شماره 2، 1111
58. "استفاده از روش بیزی در تعیین اندازه نمونه برای آزمایشی در ارتباط با تفاضل پارامترهای دوتوزیع دوجمله ای غیرمستقل"
    واحد معروفی ، حمید پزشک
    نشریه دانشجویی آمار (ندا)، نسخه 3، شماره 1، 1111

مقالات علمی ارائه شده در همایش‌ها

1. "Detecting genome-wide Copy Number Variation from Next Generation Sequencing data"
   Seyyed Amir Malek Pour, Mehdi Sadeghi, Hamid Pezeshk
   13th Iranian Statistics Conference, 2016
2. "A Note on the Parrondos Paradox"
   N. Ejlali, M. Sadeghi, Hamid Pezeshk
   Tenth Seminar on Stochastic Processes, 2015
3. "Generalized Viterbi Algorithm Based on Spatial Statistics"
   Hamid Pezeshk, Vahid Rezaietabar
   12th iranian statistical conference, 2014
4. "A Hybrid Statistical Measure for Biological Seqence Comparison"
   Hamid Pezeshk, Fatemeh Falahdoost
   12th iranian statistical conference, 2014
5. "Boosting accuracy of hidden Markov models in protein structure prediction by categorizing amino acids solvent accessibility"
   Mehdi Sadeghi, Hamid Pezeshk, Seyed Amir Malekpour, Changiz Eslahchi
   12th iranian statistical conference, 2014
6. "A method based on Birth - death process for simulating the epidemic spread of disease in a community"
   Fatemeh Movahedi, Changiz Eslahchi, Hamid Pezeshk
   12th iranian statistical conference, 2014
7. "A Monte Carlo Markov Chain Method in An Optimization Probelem"
   Hamid Pezeshk
   The 44th Annual Iranian Mathematics Conference, 2013
8. "A MONTE CARLO MARKOV CHAIN METHOD IN AN OPTIMIZATION PROBLEM"
   Maryam Bideli, Hamid Pezeshk
   the 44 th annual Iranian Mathematics Conference, 2013
9. "تعیین اندازه نمونه با استفاده از اطلاع لیندلی و اطلاع شانون برای تفاضل میان دو نسبت مستقل در دو جامعه دو جمله ای (p1-P2)"
   حمید پزشک، محمد احمدی
   سیزدهمین کنفرانس آمار ایران، 1395
10. "دهمین سمینار فرآیندهای تصادفی"
    محسن متواضع، حمید پزشک
    ترکیب الگوی مارکف پنهان دو طرفه و فیلترهای تطبیق یافته لحظه ای برای شناسایی نشانگرهای ژن، 1394
11. "مدل مارکف پنهان برای وضعیت های با رده بندی اشتباه: یک مطالعه شبه سازی"
    حمید پزشک
    نهمین سمینار احتمال و فرآیندهای تصادفی، 1392
12. "یک اندازه تشابه بر مبنای الگوی مارکف برای مقایسه دنباله های زیستی"
    حمید پزشک
    نهمین سمینار احتمال و فرآیندهای تصادفی، 1392
13. "بهینه سازی مطلوبیت یک آزمایش بالینی"
    حمید پزشک
    نهمین سمینار احتمال و فرآیندهای تصادفی، 1392